STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17048.1Stringent starvation protein B. (159 aa)    
Predicted Functional Partners:
CEO17046.1
Hypothetical protein.
 
   
 0.831
CEO16969.1
Hypothetical protein; Belongs to the UPF0335 family.
  
   
 0.777
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.773
CEO16888.1
Hypothetical protein.
  
   
 0.764
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.758
CEO16693.1
Bacterial SH3 domain protein.
  
     0.702
CEO17626.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.694
gstB
Glutathione S-transferase GST-6.0.
  
     0.672
addA
ATP-dependent helicase/nuclease subunit A.
  
     0.629
lysS
Lysine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.627
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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