Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEO17198.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.563
CEO17197.1
Hypothetical protein.
       0.561
CEO17196.1
Transposase DDE domain protein.
       0.486
CEO17200.1
Cytochrome c2.
  
    0.445
CEO17199.1
COG1585 Membrane protein implicated in regulation of membrane protease activity.
       0.432
prmC_2
Release factor glutamine methyltransferase.
       0.414
CEO17195.1
Hypothetical protein.
       0.414
CEO17862.1
Hypothetical protein.
  
  
 0.402
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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