Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEO17230.1 | CEO17231.1 | RMONA_04220 | RMONA_04225 | CcmB protein. | Hypothetical protein. | 0.563 |
| CEO17230.1 | aas | RMONA_04220 | RMONA_04440 | CcmB protein. | Bifunctional protein Aas. | 0.571 |
| CEO17230.1 | ccmA | RMONA_04220 | RMONA_01010 | CcmB protein. | Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.800 |
| CEO17230.1 | ccmC | RMONA_04220 | RMONA_01150 | CcmB protein. | Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.800 |
| CEO17230.1 | gabD | RMONA_04220 | RMONA_05315 | CcmB protein. | Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family. | 0.642 |
| CEO17230.1 | gltB | RMONA_04220 | RMONA_02200 | CcmB protein. | Glutamate synthase [NADPH] small chain. | 0.618 |
| CEO17230.1 | mnhA1 | RMONA_04220 | RMONA_04215 | CcmB protein. | Na(+)/H(+) antiporter subunit A1. | 0.783 |
| CEO17230.1 | mrpG | RMONA_04220 | RMONA_04210 | CcmB protein. | Na(+)/H(+) antiporter subunit G. | 0.590 |
| CEO17230.1 | pheT | RMONA_04220 | RMONA_05105 | CcmB protein. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.545 |
| CEO17230.1 | wfgD | RMONA_04220 | RMONA_07545 | CcmB protein. | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD. | 0.554 |
| CEO17231.1 | CEO17230.1 | RMONA_04225 | RMONA_04220 | Hypothetical protein. | CcmB protein. | 0.563 |
| CEO17231.1 | mnhA1 | RMONA_04225 | RMONA_04215 | Hypothetical protein. | Na(+)/H(+) antiporter subunit A1. | 0.563 |
| CEO17231.1 | mrpG | RMONA_04225 | RMONA_04210 | Hypothetical protein. | Na(+)/H(+) antiporter subunit G. | 0.436 |
| aas | CEO17230.1 | RMONA_04440 | RMONA_04220 | Bifunctional protein Aas. | CcmB protein. | 0.571 |
| aas | gabD | RMONA_04440 | RMONA_05315 | Bifunctional protein Aas. | Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; Belongs to the aldehyde dehydrogenase family. | 0.822 |
| aas | gltB | RMONA_04440 | RMONA_02200 | Bifunctional protein Aas. | Glutamate synthase [NADPH] small chain. | 0.817 |
| aas | wfgD | RMONA_04440 | RMONA_07545 | Bifunctional protein Aas. | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD. | 0.869 |
| ccmA | CEO17230.1 | RMONA_01010 | RMONA_04220 | Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | CcmB protein. | 0.800 |
| ccmA | ccmC | RMONA_01010 | RMONA_01150 | Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | 0.997 |
| ccmC | CEO17230.1 | RMONA_01150 | RMONA_04220 | Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. | CcmB protein. | 0.800 |
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