Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
accD5Putative propionyl-CoA carboxylase beta chain 5. (514 aa)    
Predicted Functional Partners:
accA1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.999
fadB
Fatty acid oxidation complex subunit alpha.
  
 
 0.955
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.873
aas
Bifunctional protein Aas.
  
 
 0.853
pta
Phosphate acetyltransferase.
  
  
 0.827
birA
Bifunctional ligase/repressor BirA.
  
 
 0.785
phbA
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.724
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.670
gltA
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.619
tme
NADP-dependent malic enzyme.
  
 
 0.596
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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