STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kinASporulation kinase A. (599 aa)    
Predicted Functional Partners:
glnG
Nitrogen regulation protein NR(I).
 
 0.984
ctrA
Cell cycle response regulator CtrA.
 
 
 
 0.778
ompR
Transcriptional regulatory protein OmpR.
 
 
 
 0.773
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 
 0.729
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 
 0.729
envZ
Osmolarity sensor protein EnvZ.
 
 
 
 0.491
pleC
Non-motile and phage-resistance protein.
 
 
 
 0.452
pleD
Response regulator PleD.
 
   
 0.443
CEO17294.1
Hypothetical protein.
       0.438
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.