Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEO17305.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
CEO17307.1
Hypothetical protein.
 
     0.976
CEO17306.1
Hypothetical protein.
 
     0.938
CEO17303.1
Hypothetical protein.
      0.864
CEO17304.1
Hypothetical protein.
       0.773
CEO16963.1
Retroviral aspartyl protease.
  
     0.743
CEO16718.1
Type IV secretory pathway, VirB3-like protein.
  
    0.658
CEO16722.1
Type IV secretion system protein VirB6.
 
    0.643
virB8_1
Type IV secretion system protein VirB8.
  
    0.629
virB4_1
Type IV secretion system protein virB4.
 
    0.582
CEO16723.1
Type IV secretion system protein VirB6.
 
    0.574
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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