Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
kanEAlpha-D-kanosaminyltransferase. (338 aa)    
Predicted Functional Partners:
CEO17395.1
PD-(D/E)XK nuclease family transposase.
 
     0.801
CEO17862.1
Hypothetical protein.
  
  
 0.758
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.658
ywqF
UDP-glucose 6-dehydrogenase YwqF.
 
  
 0.571
pcrA
ATP-dependent DNA helicase PcrA.
   
 
 0.571
CEO16660.1
Hypothetical protein.
   
 
 0.569
pglA
N, N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase.
  
     0.522
tagH
Teichoic acids export ATP-binding protein TagH.
 
 
 0.499
CEO17456.1
O-Antigen ligase.
 
  
 0.495
capD
UDP-glucose 4-epimerase.
  
  
 0.455
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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