Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEO16552.1 | CEO17072.1 | RMONA_00650 | RMONA_03385 | DNA polymerase III subunit delta. | DNA polymerase III subunit delta'. | 0.999 |
| CEO16552.1 | dnaE1 | RMONA_00650 | RMONA_00915 | DNA polymerase III subunit delta. | DNA polymerase III subunit alpha. | 0.999 |
| CEO16552.1 | dnaN | RMONA_00650 | RMONA_05110 | DNA polymerase III subunit delta. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| CEO16552.1 | dnaQ | RMONA_00650 | RMONA_03270 | DNA polymerase III subunit delta. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.961 |
| CEO16552.1 | dnaX | RMONA_00650 | RMONA_01980 | DNA polymerase III subunit delta. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| CEO16552.1 | mutL | RMONA_00650 | RMONA_02680 | DNA polymerase III subunit delta. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.630 |
| CEO16552.1 | polA | RMONA_00650 | RMONA_00495 | DNA polymerase III subunit delta. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.725 |
| CEO17072.1 | CEO16552.1 | RMONA_03385 | RMONA_00650 | DNA polymerase III subunit delta'. | DNA polymerase III subunit delta. | 0.999 |
| CEO17072.1 | dnaE1 | RMONA_03385 | RMONA_00915 | DNA polymerase III subunit delta'. | DNA polymerase III subunit alpha. | 0.999 |
| CEO17072.1 | dnaN | RMONA_03385 | RMONA_05110 | DNA polymerase III subunit delta'. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| CEO17072.1 | dnaQ | RMONA_03385 | RMONA_03270 | DNA polymerase III subunit delta'. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.951 |
| CEO17072.1 | dnaX | RMONA_03385 | RMONA_01980 | DNA polymerase III subunit delta'. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| CEO17072.1 | mutL | RMONA_03385 | RMONA_02680 | DNA polymerase III subunit delta'. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.674 |
| CEO17072.1 | polA | RMONA_03385 | RMONA_00495 | DNA polymerase III subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.991 |
| dnaE1 | CEO16552.1 | RMONA_00915 | RMONA_00650 | DNA polymerase III subunit alpha. | DNA polymerase III subunit delta. | 0.999 |
| dnaE1 | CEO17072.1 | RMONA_00915 | RMONA_03385 | DNA polymerase III subunit alpha. | DNA polymerase III subunit delta'. | 0.999 |
| dnaE1 | dnaN | RMONA_00915 | RMONA_05110 | DNA polymerase III subunit alpha. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| dnaE1 | dnaQ | RMONA_00915 | RMONA_03270 | DNA polymerase III subunit alpha. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.999 |
| dnaE1 | dnaX | RMONA_00915 | RMONA_01980 | DNA polymerase III subunit alpha. | DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| dnaE1 | mutL | RMONA_00915 | RMONA_02680 | DNA polymerase III subunit alpha. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.494 |
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