STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17447.1Helix-turn-helix domain protein. (158 aa)    
Predicted Functional Partners:
CEO17709.1
Anaerobic benzoate catabolism transcriptional regulator.
  
     0.755
CEO16552.1
DNA polymerase III subunit delta.
  
     0.738
CEO16952.1
DNA polymerase III subunit chi.
 
     0.610
CEO17359.1
Transglycosylase SLT domain protein.
 
     0.541
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
     
 0.530
CEO17446.1
N-acetyl-anhydromuranmyl-L-alanine amidase.
       0.523
CEO16528.1
Putative permease YjgP/YjgQ family protein.
 
     0.513
CEO16953.1
Putative permease YjgP/YjgQ family protein.
 
     0.482
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
    0.471
ftsB
Cell division protein FtsB.
 
     0.456
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.