Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEO17455.1Hypothetical protein. (157 aa)    
Predicted Functional Partners:
CEO17456.1
O-Antigen ligase.
 
     0.855
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
  
     0.596
dsbB
Disulfide bond formation protein B.
 
     0.552
CEO17291.1
Hypothetical protein; COQ9.
  
     0.512
surA
Chaperone SurA.
  
     0.506
CEO16556.1
Hypothetical protein.
  
     0.489
CEO17025.1
Hypothetical protein.
  
     0.488
CEO17626.1
PD-(D/E)XK nuclease superfamily protein.
  
     0.487
ndhC
NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
       0.466
CEO16945.1
Hypothetical protein.
 
     0.434
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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