STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17456.1O-Antigen ligase. (457 aa)    
Predicted Functional Partners:
CEO17455.1
Hypothetical protein.
 
     0.852
capD
UDP-glucose 4-epimerase.
  
  
 0.805
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
 
     0.753
wfgD
UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD.
  
  
 0.751
atpF
ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
     0.746
CEO17882.1
Hypothetical protein.
 
     0.733
surA
Chaperone SurA.
 
     0.709
CEO17226.1
Outer membrane protein (OmpH-like).
 
     0.702
CEO16552.1
DNA polymerase III subunit delta.
  
    0.698
CEO16976.1
Hypothetical protein.
 
     0.697
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.