STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17487.1UMP phosphatase. (286 aa)    
Predicted Functional Partners:
envZ
Osmolarity sensor protein EnvZ.
  
 
   0.613
CEO16953.1
Putative permease YjgP/YjgQ family protein.
 
     0.477
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
    0.470
CEO16528.1
Putative permease YjgP/YjgQ family protein.
 
     0.442
cmk
Cytidylate kinase.
  
    0.442
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
   0.436
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
   0.436
CEO16952.1
DNA polymerase III subunit chi.
  
     0.431
CEO17848.1
Putative assembly protein.
  
     0.418
CEO17456.1
O-Antigen ligase.
  
     0.413
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.