STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO17495.1HEPN domain protein. (173 aa)    
Predicted Functional Partners:
CEO17494.1
Hypothetical protein.
      0.696
secA
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
       0.524
CEO16723.1
Type IV secretion system protein VirB6.
  
     0.521
CEO17025.1
Hypothetical protein.
  
     0.499
CEO16556.1
Hypothetical protein.
  
     0.485
CEO17154.1
Hypothetical protein.
  
     0.475
CEO16722.1
Type IV secretion system protein VirB6.
  
     0.473
CEO17423.1
Tim44-like domain protein.
  
     0.473
CEO17496.1
Ankyrin repeat protein.
       0.448
CEO17199.1
COG1585 Membrane protein implicated in regulation of membrane protease activity.
 
     0.434
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.