STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
luxQ_1Autoinducer 2 sensor kinase/phosphatase LuxQ. (316 aa)    
Predicted Functional Partners:
ctrA
Cell cycle response regulator CtrA.
 
 
 0.999
pleD
Response regulator PleD.
 
 0.999
ompR
Transcriptional regulatory protein OmpR.
 
 
 0.999
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.996
yycG
Sensor histidine kinase YycG.
 
  
 0.878
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
 
 
0.873
fadB
Fatty acid oxidation complex subunit alpha.
  
 
 0.865
CEO17200.1
Cytochrome c2.
    
 
 0.861
lpd
Dihydrolipoyl dehydrogenase.
   
 0.853
lpd3
Dihydrolipoyl dehydrogenase 3.
   
 0.853
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.