Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
osmYOsmotically-inducible protein Y precursor. (205 aa)    
Predicted Functional Partners:
rlpA
RlpA-like protein precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
       0.778
CEO17609.1
Hypothetical protein.
       0.773
CEO16524.1
SmpA / OmlA family protein.
  
  
 0.531
CEO17226.1
Outer membrane protein (OmpH-like).
  
  
 0.520
atpF2
ATP synthase subunit b 2.
  
     0.490
CEO17611.1
Hypothetical protein.
       0.447
yciB
Intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
       0.407
CEO17614.1
Hypothetical protein.
       0.407
efeU
Ferrous iron permease EfeU.
       0.406
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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