Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ubiG_5Ubiquinone biosynthesis O-methyltransferase. (440 aa)    
Predicted Functional Partners:
recJ
Single-stranded-DNA-specific exonuclease RecJ.
  
    0.650
ispB
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.570
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
  
     0.539
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
       0.447
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.425
CEO17447.1
Helix-turn-helix domain protein.
  
     0.421
hemA
5-aminolevulinate synthase.
  
  
 0.412
ihfB
Integration host factor subunit beta; Belongs to the bacterial histone-like protein family.
     
 0.406
CEO17862.1
Hypothetical protein.
  
  
 0.402
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
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