Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEO17871.1 | CEO17872.1 | RMONA_07600 | RMONA_07605 | Hypothetical protein. | Hypothetical protein. | 0.558 |
CEO17871.1 | CEO17873.1 | RMONA_07600 | RMONA_07610 | Hypothetical protein. | Transposase DDE domain protein. | 0.479 |
CEO17871.1 | CEO17874.1 | RMONA_07600 | RMONA_07615 | Hypothetical protein. | Hypothetical protein. | 0.405 |
CEO17871.1 | CEO17875.1 | RMONA_07600 | RMONA_07620 | Hypothetical protein. | Hypothetical protein. | 0.405 |
CEO17871.1 | recA | RMONA_07600 | RMONA_00605 | Hypothetical protein. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.551 |
CEO17871.1 | topA | RMONA_07600 | RMONA_07630 | Hypothetical protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.613 |
CEO17871.1 | tsaA | RMONA_07600 | RMONA_07595 | Hypothetical protein. | Putative peroxiredoxin. | 0.424 |
CEO17872.1 | CEO17871.1 | RMONA_07605 | RMONA_07600 | Hypothetical protein. | Hypothetical protein. | 0.558 |
CEO17872.1 | CEO17873.1 | RMONA_07605 | RMONA_07610 | Hypothetical protein. | Transposase DDE domain protein. | 0.655 |
CEO17872.1 | CEO17874.1 | RMONA_07605 | RMONA_07615 | Hypothetical protein. | Hypothetical protein. | 0.543 |
CEO17872.1 | CEO17875.1 | RMONA_07605 | RMONA_07620 | Hypothetical protein. | Hypothetical protein. | 0.543 |
CEO17872.1 | topA | RMONA_07605 | RMONA_07630 | Hypothetical protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.494 |
CEO17873.1 | CEO17871.1 | RMONA_07610 | RMONA_07600 | Transposase DDE domain protein. | Hypothetical protein. | 0.479 |
CEO17873.1 | CEO17872.1 | RMONA_07610 | RMONA_07605 | Transposase DDE domain protein. | Hypothetical protein. | 0.655 |
CEO17873.1 | CEO17874.1 | RMONA_07610 | RMONA_07615 | Transposase DDE domain protein. | Hypothetical protein. | 0.636 |
CEO17873.1 | CEO17875.1 | RMONA_07610 | RMONA_07620 | Transposase DDE domain protein. | Hypothetical protein. | 0.636 |
CEO17873.1 | topA | RMONA_07610 | RMONA_07630 | Transposase DDE domain protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.577 |
CEO17874.1 | CEO17871.1 | RMONA_07615 | RMONA_07600 | Hypothetical protein. | Hypothetical protein. | 0.405 |
CEO17874.1 | CEO17872.1 | RMONA_07615 | RMONA_07605 | Hypothetical protein. | Hypothetical protein. | 0.543 |
CEO17874.1 | CEO17873.1 | RMONA_07615 | RMONA_07610 | Hypothetical protein. | Transposase DDE domain protein. | 0.636 |
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