Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEO16552.1 | CEO16945.1 | RMONA_00650 | RMONA_02710 | DNA polymerase III subunit delta. | Hypothetical protein. | 0.736 |
CEO16552.1 | CEO17456.1 | RMONA_00650 | RMONA_05405 | DNA polymerase III subunit delta. | O-Antigen ligase. | 0.698 |
CEO16552.1 | CEO17882.1 | RMONA_00650 | RMONA_07655 | DNA polymerase III subunit delta. | Hypothetical protein. | 0.709 |
CEO16552.1 | atpF | RMONA_00650 | RMONA_01745 | DNA polymerase III subunit delta. | ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.684 |
CEO16552.1 | ftsB | RMONA_00650 | RMONA_05150 | DNA polymerase III subunit delta. | Cell division protein FtsB. | 0.657 |
CEO16650.1 | CEO17456.1 | RMONA_01140 | RMONA_05405 | Putative adhesin RP828 precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | O-Antigen ligase. | 0.614 |
CEO16650.1 | CEO17882.1 | RMONA_01140 | RMONA_07655 | Putative adhesin RP828 precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Hypothetical protein. | 0.781 |
CEO16650.1 | atpF | RMONA_01140 | RMONA_01745 | Putative adhesin RP828 precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.497 |
CEO16650.1 | tolB | RMONA_01140 | RMONA_04675 | Putative adhesin RP828 precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | Protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.443 |
CEO16945.1 | CEO16552.1 | RMONA_02710 | RMONA_00650 | Hypothetical protein. | DNA polymerase III subunit delta. | 0.736 |
CEO16945.1 | CEO17456.1 | RMONA_02710 | RMONA_05405 | Hypothetical protein. | O-Antigen ligase. | 0.654 |
CEO16945.1 | CEO17882.1 | RMONA_02710 | RMONA_07655 | Hypothetical protein. | Hypothetical protein. | 0.691 |
CEO16945.1 | atpF | RMONA_02710 | RMONA_01745 | Hypothetical protein. | ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.704 |
CEO16945.1 | atpF2 | RMONA_02710 | RMONA_01740 | Hypothetical protein. | ATP synthase subunit b 2. | 0.449 |
CEO16945.1 | ftsB | RMONA_02710 | RMONA_05150 | Hypothetical protein. | Cell division protein FtsB. | 0.733 |
CEO17456.1 | CEO16552.1 | RMONA_05405 | RMONA_00650 | O-Antigen ligase. | DNA polymerase III subunit delta. | 0.698 |
CEO17456.1 | CEO16650.1 | RMONA_05405 | RMONA_01140 | O-Antigen ligase. | Putative adhesin RP828 precursor; Belongs to the outer membrane OOP (TC 1.B.6) superfamily. | 0.614 |
CEO17456.1 | CEO16945.1 | RMONA_05405 | RMONA_02710 | O-Antigen ligase. | Hypothetical protein. | 0.654 |
CEO17456.1 | CEO17882.1 | RMONA_05405 | RMONA_07655 | O-Antigen ligase. | Hypothetical protein. | 0.733 |
CEO17456.1 | atpF | RMONA_05405 | RMONA_01745 | O-Antigen ligase. | ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.746 |
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