Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEO16524.1 | CEO16556.1 | RMONA_00505 | RMONA_00670 | SmpA / OmlA family protein. | Hypothetical protein. | 0.685 |
CEO16524.1 | CEO16953.1 | RMONA_00505 | RMONA_02770 | SmpA / OmlA family protein. | Putative permease YjgP/YjgQ family protein. | 0.418 |
CEO16524.1 | CEO17025.1 | RMONA_00505 | RMONA_03135 | SmpA / OmlA family protein. | Hypothetical protein. | 0.633 |
CEO16524.1 | CEO17626.1 | RMONA_00505 | RMONA_06335 | SmpA / OmlA family protein. | PD-(D/E)XK nuclease superfamily protein. | 0.574 |
CEO16524.1 | lolA | RMONA_00505 | RMONA_01985 | SmpA / OmlA family protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.802 |
CEO16524.1 | lptD | RMONA_00505 | RMONA_08455 | SmpA / OmlA family protein. | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.741 |
CEO16528.1 | CEO16953.1 | RMONA_00530 | RMONA_02770 | Putative permease YjgP/YjgQ family protein. | Putative permease YjgP/YjgQ family protein. | 0.999 |
CEO16528.1 | CEO17626.1 | RMONA_00530 | RMONA_06335 | Putative permease YjgP/YjgQ family protein. | PD-(D/E)XK nuclease superfamily protein. | 0.586 |
CEO16528.1 | CEO17717.1 | RMONA_00530 | RMONA_06805 | Putative permease YjgP/YjgQ family protein. | OstA-like protein. | 0.479 |
CEO16528.1 | lptD | RMONA_00530 | RMONA_08455 | Putative permease YjgP/YjgQ family protein. | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.729 |
CEO16528.1 | surA | RMONA_00530 | RMONA_08450 | Putative permease YjgP/YjgQ family protein. | Chaperone SurA. | 0.523 |
CEO16556.1 | CEO16524.1 | RMONA_00670 | RMONA_00505 | Hypothetical protein. | SmpA / OmlA family protein. | 0.685 |
CEO16556.1 | CEO16928.1 | RMONA_00670 | RMONA_02620 | Hypothetical protein. | Hypothetical protein. | 0.538 |
CEO16556.1 | CEO17025.1 | RMONA_00670 | RMONA_03135 | Hypothetical protein. | Hypothetical protein. | 0.745 |
CEO16556.1 | CEO17626.1 | RMONA_00670 | RMONA_06335 | Hypothetical protein. | PD-(D/E)XK nuclease superfamily protein. | 0.678 |
CEO16556.1 | lolA | RMONA_00670 | RMONA_01985 | Hypothetical protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.636 |
CEO16556.1 | lptD | RMONA_00670 | RMONA_08455 | Hypothetical protein. | LPS-assembly protein LptD precursor; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.697 |
CEO16556.1 | surA | RMONA_00670 | RMONA_08450 | Hypothetical protein. | Chaperone SurA. | 0.668 |
CEO16928.1 | CEO16556.1 | RMONA_02620 | RMONA_00670 | Hypothetical protein. | Hypothetical protein. | 0.538 |
CEO16928.1 | CEO17025.1 | RMONA_02620 | RMONA_03135 | Hypothetical protein. | Hypothetical protein. | 0.721 |
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