STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEO18058.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
CEO18057.1
Hypothetical protein; PHB de-polymerase C-terminus.
     0.941
CEO18050.1
Hypothetical protein; PHB de-polymerase C-terminus.
 
     0.896
CEO17882.1
Hypothetical protein.
  
     0.669
CEO16722.1
Type IV secretion system protein VirB6.
  
     0.569
surA
Chaperone SurA.
  
     0.506
CEO16723.1
Type IV secretion system protein VirB6.
  
     0.503
atpF
ATP synthase subunit b precursor; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.495
fadB
Fatty acid oxidation complex subunit alpha.
      
 0.470
CEO16928.1
Hypothetical protein.
  
     0.468
CEO16607.1
Hypothetical protein; Split gene in original assembly 785 790.
  
     0.449
Your Current Organism:
Rickettsia monacensis
NCBI taxonomy Id: 109232
Other names: R. monacensis, Rickettsia sp. IrR/Munich, strain IrR/Munich
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.