STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_012100HLH transcription factor (GlcD gamma). (520 aa)    
Predicted Functional Partners:
ABOM_003062
Endo-1.
    
 0.687
ABOM_011186
DNA damage checkpoint protein rad24; Belongs to the 14-3-3 family.
    
 0.661
ABOM_009236
Protein BMH2; Belongs to the 14-3-3 family.
    
 0.661
ABOM_005794
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.661
ABOM_007014
Protein LST8.
    
 
 0.629
ABOM_006818
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.612
ABOM_007217
14_3_3 domain-containing protein.
    
 0.597
ABOM_004180
Ubiquitin-like protein SMT3.
    
  0.576
ABOM_008885
WD repeat-containing protein mip1.
    
 
 0.545
ABOM_010590
Kinetochore protein fta4.
    
 0.535
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.