STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_011730Chromatin-remodeling complex subunit ies6. (188 aa)    
Predicted Functional Partners:
ABOM_011732
Actin-like protein arp5; Belongs to the actin family.
    
 0.996
ABOM_010200
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.992
ABOM_008847
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.989
ABOM_005394
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.976
ABOM_005359
Actin-related protein 4; Belongs to the actin family.
    
 0.975
ABOM_006985
DNA helicase ino80.
    
 0.962
ABOM_011021
Histone H2B; Belongs to the histone H2B family.
   
   0.884
ABOM_006360
Uncharacterized protein.
    
 0.866
ABOM_005138
Ubiquitin carboxyl-terminal hydrolase 2.
    
  0.837
ABOM_011594
Actin-1; Belongs to the actin family.
    
 0.831
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.