STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_012020Phenylacetate 2-hydroxylase. (525 aa)    
Predicted Functional Partners:
ABOM_011702
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.669
ABOM_002622
Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family.
    
 0.669
ABOM_001519
Cytochrome B5; Belongs to the cytochrome b5 family.
    
 0.669
ABOM_004706
AP endonuclease.
    
  0.645
ABOM_005590
General amidase-B.
    
  0.632
ABOM_005548
General amidase-B.
    
  0.632
ABOM_006076
Tryptophan synthase.
    
  0.630
ABOM_005498
Tryptophan synthase.
    
  0.630
ABOM_000915
4-hydroxyphenylpyruvate dioxygenase.
   
 
  0.625
ABOM_006288
Putative 3-5 exonuclease.
    
  0.589
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.