STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_012017Exportin KapK. (1072 aa)    
Predicted Functional Partners:
ABOM_001370
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.996
ABOM_000837
Nuclear pore complex subunit Nup159.
    
 0.988
ABOM_001367
RanBP1 domain protein.
   
 0.959
ABOM_007432
Nuclear protein export protein Yrb2.
    
 
 0.947
ABOM_008967
Nucleoporin SONB.
    
 0.934
ABOM_008966
Nucleoporin SONB.
    
 0.934
ABOM_008900
Uncharacterized protein.
   
 
 0.933
ABOM_008901
Ran-specific GTPase-activating protein 1.
   
 
 0.933
ABOM_004081
Uncharacterized protein.
    
 0.932
ABOM_005270
BZIP transcription factor (AP-1).
    
 
 0.926
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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