Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_000837 | ABOM_001367 | A0A1F8AGF0 | A0A1F8AE37 | Nuclear pore complex subunit Nup159. | RanBP1 domain protein. | 0.999 |
ABOM_000837 | ABOM_001370 | A0A1F8AGF0 | A0A1F8AFH2 | Nuclear pore complex subunit Nup159. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.962 |
ABOM_000837 | ABOM_007432 | A0A1F8AGF0 | A0A1F7ZZP0 | Nuclear pore complex subunit Nup159. | Nuclear protein export protein Yrb2. | 0.860 |
ABOM_000837 | ABOM_008900 | A0A1F8AGF0 | A0A1F7ZPY8 | Nuclear pore complex subunit Nup159. | Uncharacterized protein. | 0.892 |
ABOM_000837 | ABOM_008901 | A0A1F8AGF0 | A0A1F7ZPZ3 | Nuclear pore complex subunit Nup159. | Ran-specific GTPase-activating protein 1. | 0.892 |
ABOM_000837 | ABOM_008966 | A0A1F8AGF0 | A0A1F7ZUE6 | Nuclear pore complex subunit Nup159. | Nucleoporin SONB. | 0.973 |
ABOM_000837 | ABOM_008967 | A0A1F8AGF0 | A0A1F7ZTV1 | Nuclear pore complex subunit Nup159. | Nucleoporin SONB. | 0.973 |
ABOM_000837 | ABOM_012017 | A0A1F8AGF0 | A0A1F7ZK94 | Nuclear pore complex subunit Nup159. | Exportin KapK. | 0.988 |
ABOM_001367 | ABOM_000837 | A0A1F8AE37 | A0A1F8AGF0 | RanBP1 domain protein. | Nuclear pore complex subunit Nup159. | 0.999 |
ABOM_001367 | ABOM_001370 | A0A1F8AE37 | A0A1F8AFH2 | RanBP1 domain protein. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.997 |
ABOM_001367 | ABOM_004081 | A0A1F8AE37 | A0A1F8ACU8 | RanBP1 domain protein. | Uncharacterized protein. | 0.999 |
ABOM_001367 | ABOM_007432 | A0A1F8AE37 | A0A1F7ZZP0 | RanBP1 domain protein. | Nuclear protein export protein Yrb2. | 0.999 |
ABOM_001367 | ABOM_008900 | A0A1F8AE37 | A0A1F7ZPY8 | RanBP1 domain protein. | Uncharacterized protein. | 0.999 |
ABOM_001367 | ABOM_008901 | A0A1F8AE37 | A0A1F7ZPZ3 | RanBP1 domain protein. | Ran-specific GTPase-activating protein 1. | 0.999 |
ABOM_001367 | ABOM_008966 | A0A1F8AE37 | A0A1F7ZUE6 | RanBP1 domain protein. | Nucleoporin SONB. | 0.844 |
ABOM_001367 | ABOM_008967 | A0A1F8AE37 | A0A1F7ZTV1 | RanBP1 domain protein. | Nucleoporin SONB. | 0.844 |
ABOM_001367 | ABOM_012017 | A0A1F8AE37 | A0A1F7ZK94 | RanBP1 domain protein. | Exportin KapK. | 0.959 |
ABOM_001370 | ABOM_000837 | A0A1F8AFH2 | A0A1F8AGF0 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Nuclear pore complex subunit Nup159. | 0.962 |
ABOM_001370 | ABOM_001367 | A0A1F8AFH2 | A0A1F8AE37 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | RanBP1 domain protein. | 0.997 |
ABOM_001370 | ABOM_004081 | A0A1F8AFH2 | A0A1F8ACU8 | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | Uncharacterized protein. | 0.858 |
page 1 of 5