STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_011385Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1323 aa)    
Predicted Functional Partners:
ABOM_011196
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 0.994
ABOM_008763
RNA polymerase II Elongator subunit.
   
 0.993
ABOM_008613
PAXNEB protein superfamily.
   
 0.991
ABOM_001180
Killer toxin sensitivity protein (Iki1).
   
 0.971
ABOM_010340
DPBB_1 domain-containing protein.
   
 0.942
ABOM_009797
RNA polymerase II Elongator complex associated protein Kti12.
    
 
 0.827
ABOM_005292
Putative pre-rRNA processing protein Esf1.
   
    0.824
ABOM_010186
DPH-type MB domain-containing protein.
   
 
 0.804
ABOM_008084
Diphthamide biosynthesis protein 4.
   
 
 0.754
ABOM_010341
Putative molybdenum cofactor biosynthetic protein (CnxF).
   
 
 0.732
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.