Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_004412 | ABOM_004776 | A0A1F8A5E2 | A0A1F8A3Q0 | RNA helicase. | Ribosomal assembly complex component Ipi3. | 0.878 |
ABOM_004412 | ABOM_009532 | A0A1F8A5E2 | A0A1F7ZRS4 | RNA helicase. | Pre-rRNA-processing protein IPI1. | 0.431 |
ABOM_004412 | ABOM_011190 | A0A1F8A5E2 | A0A1F7ZL26 | RNA helicase. | Integral membrane protein (Ytp1). | 0.486 |
ABOM_004412 | ABOM_011421 | A0A1F8A5E2 | A0A1F7ZLZ8 | RNA helicase. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.989 |
ABOM_004412 | ERB1 | A0A1F8A5E2 | A0A1F7ZWE7 | RNA helicase. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
ABOM_004412 | NOP7 | A0A1F8A5E2 | A0A1F8A5R1 | RNA helicase. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.994 |
ABOM_004776 | ABOM_004412 | A0A1F8A3Q0 | A0A1F8A5E2 | Ribosomal assembly complex component Ipi3. | RNA helicase. | 0.878 |
ABOM_004776 | ABOM_009532 | A0A1F8A3Q0 | A0A1F7ZRS4 | Ribosomal assembly complex component Ipi3. | Pre-rRNA-processing protein IPI1. | 0.999 |
ABOM_004776 | ABOM_011190 | A0A1F8A3Q0 | A0A1F7ZL26 | Ribosomal assembly complex component Ipi3. | Integral membrane protein (Ytp1). | 0.614 |
ABOM_004776 | ABOM_011421 | A0A1F8A3Q0 | A0A1F7ZLZ8 | Ribosomal assembly complex component Ipi3. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.992 |
ABOM_004776 | ERB1 | A0A1F8A3Q0 | A0A1F7ZWE7 | Ribosomal assembly complex component Ipi3. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.982 |
ABOM_004776 | NOP7 | A0A1F8A3Q0 | A0A1F8A5R1 | Ribosomal assembly complex component Ipi3. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.969 |
ABOM_004834 | ABOM_011190 | A0A1F8A3X8 | A0A1F7ZL26 | Putative myosin type II heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Integral membrane protein (Ytp1). | 0.452 |
ABOM_009532 | ABOM_004412 | A0A1F7ZRS4 | A0A1F8A5E2 | Pre-rRNA-processing protein IPI1. | RNA helicase. | 0.431 |
ABOM_009532 | ABOM_004776 | A0A1F7ZRS4 | A0A1F8A3Q0 | Pre-rRNA-processing protein IPI1. | Ribosomal assembly complex component Ipi3. | 0.999 |
ABOM_009532 | ABOM_011190 | A0A1F7ZRS4 | A0A1F7ZL26 | Pre-rRNA-processing protein IPI1. | Integral membrane protein (Ytp1). | 0.584 |
ABOM_009532 | ABOM_011421 | A0A1F7ZRS4 | A0A1F7ZLZ8 | Pre-rRNA-processing protein IPI1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.988 |
ABOM_009532 | ERB1 | A0A1F7ZRS4 | A0A1F7ZWE7 | Pre-rRNA-processing protein IPI1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.832 |
ABOM_009532 | NOP7 | A0A1F7ZRS4 | A0A1F8A5R1 | Pre-rRNA-processing protein IPI1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.863 |
ABOM_011190 | ABOM_004412 | A0A1F7ZL26 | A0A1F8A5E2 | Integral membrane protein (Ytp1). | RNA helicase. | 0.486 |
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