STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_010794C-4 methylsterol oxidase; Belongs to the sterol desaturase family. (165 aa)    
Predicted Functional Partners:
ABOM_011566
Uncharacterized protein.
   
 0.989
ABOM_008236
C-3 sterol dehydrogenase/C-4 decarboxylase family protein.
  
 0.984
ABOM_009596
Squalene epoxidase.
  
 
 0.978
ABOM_005134
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.977
ABOM_008757
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.976
ABOM_002249
C-8 sterol isomerase.
   
 0.968
ABOM_010887
Squalene synthase.
  
 0.959
ABOM_011511
C-3 sterol dehydrogenase/C-4 decarboxylase.
   
 0.957
ABOM_011931
Ergosterol biosynthetic protein 28.
   
 
 0.935
ABOM_001559
Putative sterol desaturase; Belongs to the sterol desaturase family.
  
 0.920
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.