STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_011135DAO domain-containing protein. (350 aa)    
Predicted Functional Partners:
ABOM_007025
Aminotransferase.
  
 
 0.887
ABOM_010154
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.866
ABOM_005507
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.866
ABOM_007773
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.853
ABOM_008242
Isocitrate lyase.
   
 
 0.851
ABOM_004532
Proline racemase.
    
  0.849
ABOM_004275
Threonine aldolase.
     
 0.847
ABOM_000425
Dihydrodipicolinate synthase-like protein; Belongs to the DapA family.
   
 
  0.842
ABOM_006924
Malate synthase; Belongs to the malate synthase family.
   
 
 0.841
ABOM_009549
Fructosyl amine:oxygen oxidoreductase.
   
 
  0.838
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.