Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_000565 | ABOM_010011 | A0A1F8AFQ5 | A0A1F7ZNP1 | Threonine aldolase. | Acetoacetyl-CoA synthase. | 0.408 |
ABOM_000565 | ABOM_010443 | A0A1F8AFQ5 | A0A1F7ZNS2 | Threonine aldolase. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.513 |
ABOM_000851 | ABOM_005039 | A0A1F8AFB7 | A0A1F8A578 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Gibberellin 20-oxidase. | 0.618 |
ABOM_000851 | ABOM_005674 | A0A1F8AFB7 | A0A1F8A2T9 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Putative kinase activator (Atg17). | 0.996 |
ABOM_000851 | ABOM_010443 | A0A1F8AFB7 | A0A1F7ZNS2 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.618 |
ABOM_002575 | ABOM_007585 | A0A1F8A7W7 | A0A1F7ZWH2 | NADPH dehydrogenase. | Putative MFS transporter. | 0.593 |
ABOM_002575 | ABOM_008954 | A0A1F8A7W7 | A0A1F7ZTB2 | NADPH dehydrogenase. | Xanthine dehydrogenase. | 0.526 |
ABOM_002575 | ABOM_010443 | A0A1F8A7W7 | A0A1F7ZNS2 | NADPH dehydrogenase. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.577 |
ABOM_004770 | ABOM_010443 | A0A1F8A3Q3 | A0A1F7ZNS2 | Dihydrofolate reductase. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.518 |
ABOM_005039 | ABOM_000851 | A0A1F8A578 | A0A1F8AFB7 | Gibberellin 20-oxidase. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.618 |
ABOM_005039 | ABOM_005674 | A0A1F8A578 | A0A1F8A2T9 | Gibberellin 20-oxidase. | Putative kinase activator (Atg17). | 0.606 |
ABOM_005039 | ABOM_010443 | A0A1F8A578 | A0A1F7ZNS2 | Gibberellin 20-oxidase. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.452 |
ABOM_005674 | ABOM_000851 | A0A1F8A2T9 | A0A1F8AFB7 | Putative kinase activator (Atg17). | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.996 |
ABOM_005674 | ABOM_005039 | A0A1F8A2T9 | A0A1F8A578 | Putative kinase activator (Atg17). | Gibberellin 20-oxidase. | 0.606 |
ABOM_005674 | ABOM_010443 | A0A1F8A2T9 | A0A1F7ZNS2 | Putative kinase activator (Atg17). | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.606 |
ABOM_007585 | ABOM_002575 | A0A1F7ZWH2 | A0A1F8A7W7 | Putative MFS transporter. | NADPH dehydrogenase. | 0.593 |
ABOM_007585 | ABOM_008954 | A0A1F7ZWH2 | A0A1F7ZTB2 | Putative MFS transporter. | Xanthine dehydrogenase. | 0.525 |
ABOM_007585 | ABOM_010443 | A0A1F7ZWH2 | A0A1F7ZNS2 | Putative MFS transporter. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.538 |
ABOM_008747 | ABOM_010443 | A0A1F7ZQP1 | A0A1F7ZNS2 | Putative SUMO ligase SizA. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.513 |
ABOM_008954 | ABOM_002575 | A0A1F7ZTB2 | A0A1F8A7W7 | Xanthine dehydrogenase. | NADPH dehydrogenase. | 0.526 |
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