STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009838Zn(2)-C6 fungal-type domain-containing protein. (726 aa)    
Predicted Functional Partners:
ABOM_012174
Tetratricopeptide repeat domain-containing protein.
    
 0.950
ABOM_011188
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 
 0.908
ABOM_010853
Uncharacterized protein.
    
 
 0.908
ABOM_003929
Uncharacterized protein.
    
 
 0.908
ABOM_010203
Steroid alpha reductase family protein.
   
 0.858
ABOM_001644
Steroid alpha reductase family protein.
   
 0.858
ABOM_009619
HLH DNA binding protein (Penr2).
    
 
 0.743
ABOM_006699
Mis12-Mtw1 family protein.
    
 
 0.663
ABOM_012184
Acyl-CoA desaturase.
     
 0.629
ABOM_011932
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 0.629
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.