Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_000106 | ABOM_001215 | A0A1F8AI03 | A0A1F8AEQ2 | Methyltransferase. | Molecular chaperone (ABC1). | 0.828 |
ABOM_000106 | ABOM_004922 | A0A1F8AI03 | A0A1F8A3A8 | Methyltransferase. | Methyltransf_25 domain-containing protein. | 0.577 |
ABOM_000106 | ABOM_009754 | A0A1F8AI03 | A0A1F7ZP96 | Methyltransferase. | Uncharacterized protein. | 0.539 |
ABOM_000106 | ABOM_010441 | A0A1F8AI03 | A0A1F7ZNU1 | Methyltransferase. | Methyltranfer_dom domain-containing protein. | 0.577 |
ABOM_000106 | ABOM_012154 | A0A1F8AI03 | A0A1F7ZIG8 | Methyltransferase. | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | 0.539 |
ABOM_000106 | COQ5 | A0A1F8AI03 | A0A1F8A0I5 | Methyltransferase. | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2). | 0.577 |
ABOM_000106 | COQ6 | A0A1F8AI03 | A0A1F8A5H0 | Methyltransferase. | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | 0.540 |
ABOM_000106 | COQ7 | A0A1F8AI03 | A0A1F7ZP55 | Methyltransferase. | 5-demethoxyubiquinone hydroxylase, mitochondrial; Catalyzes the hydroxylation of 2-polyprenyl-3-methyl-6- methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis. Has also a structural role in the COQ enzyme complex, stabilizing other COQ polypeptides. | 0.860 |
ABOM_001215 | ABOM_000106 | A0A1F8AEQ2 | A0A1F8AI03 | Molecular chaperone (ABC1). | Methyltransferase. | 0.828 |
ABOM_001215 | ABOM_001318 | A0A1F8AEQ2 | A0A1F8AFP5 | Molecular chaperone (ABC1). | SAM-dependent methyltransferase. | 0.828 |
ABOM_001215 | ABOM_004922 | A0A1F8AEQ2 | A0A1F8A3A8 | Molecular chaperone (ABC1). | Methyltransf_25 domain-containing protein. | 0.731 |
ABOM_001215 | ABOM_009754 | A0A1F8AEQ2 | A0A1F7ZP96 | Molecular chaperone (ABC1). | Uncharacterized protein. | 0.771 |
ABOM_001215 | ABOM_010441 | A0A1F8AEQ2 | A0A1F7ZNU1 | Molecular chaperone (ABC1). | Methyltranfer_dom domain-containing protein. | 0.731 |
ABOM_001215 | ABOM_012154 | A0A1F8AEQ2 | A0A1F7ZIG8 | Molecular chaperone (ABC1). | Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. | 0.803 |
ABOM_001215 | COQ3 | A0A1F8AEQ2 | A0A1F7ZUJ5 | Molecular chaperone (ABC1). | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.899 |
ABOM_001215 | COQ5 | A0A1F8AEQ2 | A0A1F8A0I5 | Molecular chaperone (ABC1). | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2). | 0.879 |
ABOM_001215 | COQ6 | A0A1F8AEQ2 | A0A1F8A5H0 | Molecular chaperone (ABC1). | Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6. | 0.741 |
ABOM_001215 | COQ7 | A0A1F8AEQ2 | A0A1F7ZP55 | Molecular chaperone (ABC1). | 5-demethoxyubiquinone hydroxylase, mitochondrial; Catalyzes the hydroxylation of 2-polyprenyl-3-methyl-6- methoxy-1,4-benzoquinol (DMQH2) during ubiquinone biosynthesis. Has also a structural role in the COQ enzyme complex, stabilizing other COQ polypeptides. | 0.726 |
ABOM_001318 | ABOM_001215 | A0A1F8AFP5 | A0A1F8AEQ2 | SAM-dependent methyltransferase. | Molecular chaperone (ABC1). | 0.828 |
ABOM_001318 | ABOM_004922 | A0A1F8AFP5 | A0A1F8A3A8 | SAM-dependent methyltransferase. | Methyltransf_25 domain-containing protein. | 0.577 |
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