STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_010063Vacuolar assembly protein. (1307 aa)    
Predicted Functional Partners:
ABOM_006966
Vacuolar protein sorting protein DigA.
    
 0.995
ABOM_006136
Vacuolar sorting protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.995
ABOM_002994
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 0.995
ABOM_000261
E3 ubiquitin-protein ligase PEP5.
   
 0.995
ABOM_010649
TGF beta receptor associated protein 1.
   
 0.993
ABOM_000607
Vacuolar morphogenesis protein AvaB.
   
 0.975
ABOM_000606
Vacuolar morphogenesis protein AvaB.
   
 0.975
ABOM_003191
Uncharacterized protein.
    
 0.974
ABOM_000828
Vacuolar fusion protein mon1.
    
 
 0.962
ABOM_008896
Ras-related protein Rab7.
    
 
 0.960
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.