STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_010233Uncharacterized protein. (87 aa)    
Predicted Functional Partners:
ABOM_002397
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 0.852
ABOM_006076
Tryptophan synthase.
  
  0.806
ABOM_005498
Tryptophan synthase.
  
  0.806
ABOM_007528
NADH-ubiquinone oxidoreductase subunit.
  
 
 0.769
ABOM_003278
DJ-1_PfpI domain-containing protein.
  
 
 0.730
ABOM_000915
4-hydroxyphenylpyruvate dioxygenase.
    
 0.728
ABOM_008355
Methylcrotonoyl-CoA carboxylase beta chain.
  
 
 0.712
ABOM_004726
Methylmalonyl-CoA decarboxylase.
  
 
 0.712
ABOM_004328
Acetyl propionyl carboxylase.
  
 
 0.712
ABOM_007182
2Fe-2S ferredoxin-type domain-containing protein.
    
 0.710
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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