STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009884Alanyl-tRNA synthetase. (270 aa)    
Predicted Functional Partners:
ABOM_005112
Putative anaphase-promoting complex component Cut20/Apc4.
   
 0.937
ABOM_003547
Cell division cycle.
   
 0.937
ABOM_005210
Negative regulator of mitosis.
    
 0.934
ABOM_005236
Anaphase-promoting complex subunit Apc5.
   
 0.934
ABOM_001239
Anaphase-promoting complex subunit ApcB; Belongs to the cullin family.
    
 0.932
ABOM_010875
Uncharacterized protein.
    
 0.928
ABOM_000990
Checkpoint protein kinase (SldA).
    
 0.916
ABOM_006416
Mitotic spindle checkpoint component mad2.
    
 0.864
ABOM_000533
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.862
ABOM_008288
Glycyl-tRNA synthetase 1.
  
 
 0.813
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.