STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009636Uncharacterized protein. (327 aa)    
Predicted Functional Partners:
ABOM_005325
Agmatinase 2; Belongs to the arginase family.
     
 0.753
ABOM_003839
Agmatinase 1; Belongs to the arginase family.
     
 0.660
ABOM_002947
Agmatinase 1; Belongs to the arginase family.
     
 0.660
ABOM_002445
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.645
ABOM_001365
Nitrilase family protein (Nit3).
 
 
 0.618
ABOM_009634
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.579
ABOM_003683
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.579
ABOM_001709
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.579
ABOM_010606
Putative nitrilase.
  
 
 0.509
ABOM_011090
Cyanide hydratase.
  
 
 0.509
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.