STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_007907APH domain-containing protein. (132 aa)    
Predicted Functional Partners:
ABOM_009306
Cross-pathway control protein A.
    
 0.856
ABOM_006878
Glutaredoxin domain-containing protein.
    
  0.764
ABOM_005842
Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family.
    
  0.762
ABOM_011349
Mitochondrial 54S ribosomal protein YmL39.
   
   0.702
ABOM_009401
Uncharacterized protein.
   
 0.679
ABOM_001936
Putative mitochondrial 37S ribosomal protein MRPS12.
   
 
 0.677
ABOM_008086
Clr5 domain-containing protein.
    
 0.664
ABOM_007308
Putative 37S ribosomal protein S11.
   
 
 0.660
ABOM_002270
MRP-L27 domain-containing protein.
   
 
 0.658
ABOM_011300
Ribosomal protein S15.
   
   0.652
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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