STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009181Proteasome component Prs2. (425 aa)    
Predicted Functional Partners:
ABOM_007527
Putative 60S ribosome biogenesis protein Rrp14.
   
   0.764
ABOM_008271
Centromere/microtubule-binding protein cbf5.
   
   0.734
ABOM_001171
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.711
ABOM_008909
Putative rRNA processing protein (Ebp2).
   
    0.673
ABOM_007183
rRNA processing protein RRP15.
   
   0.662
ABOM_004191
CCAAT-box-binding transcription factor.
   
   0.657
ABOM_002269
Putative small nucleolar ribonucleoprotein complex subunit Utp14.
   
    0.652
ABOM_009671
Ribosome biogenesis (Nop4).
   
   0.649
ABOM_012014
rRNA processing protein gar2.
   
    0.646
ABOM_004226
Protein PUF6.
   
  
 0.646
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.