STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_008184GTPase activating protein (Evi5). (892 aa)    
Predicted Functional Partners:
ABOM_005416
Ras GTPase Rab11.
    
 0.882
ABOM_009375
Secretion related GTPase SrgD.
    
 0.717
ABOM_010795
Rab GTPase SrgA.
    
 0.708
ABOM_010157
Protein ras-2.
    
 0.538
ABOM_008622
Ras-like protein.
    
 0.538
ABOM_008356
Ras-related protein RSR1.
    
 0.538
ABOM_009395
Autophagy-related protein.
    
  0.530
ABOM_009719
Ras-related protein Rab-6A.
    
 
 0.520
ABOM_008090
Uncharacterized protein.
    
 0.500
ABOM_012191
GTP-binding protein rhb1.
    
 0.494
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.