STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_007512Uncharacterized protein. (564 aa)    
Predicted Functional Partners:
ABOM_005922
tRNA m(1)G methyltransferase domain containing protein.
   
 0.785
ABOM_010403
TATA-box-binding protein.
   
  
 0.693
ABOM_000226
Rpp14 family.
     
 0.657
ABOM_003471
Ribonuclease P complex subunit Pop1.
   
 
 0.654
ABOM_010887
Squalene synthase.
   
 
 0.644
ABOM_003224
Phytoene synthase.
   
 
 0.641
ABOM_010370
rRNA biogenesis protein RRP5.
  
    0.638
ABOM_010611
Ribosomal_L18_c domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.636
ABOM_010016
Putative ribonuclease P complex subunit Pop2.
   
 
 0.604
ABOM_011068
Uncharacterized protein.
   
 
 0.599
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.