STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009204Homeobox transcription factor. (317 aa)    
Predicted Functional Partners:
ABOM_001017
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.780
ABOM_011178
Histone deacetylase 1.
    
 0.682
ABOM_008532
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.682
ABOM_001964
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.682
ABOM_010450
Homeobox transcription factor.
    
 
 0.651
ABOM_009214
Putative homeobox transcription factor (RfeB).
    
 
 0.591
ABOM_012169
Putative homeobox transcription factor.
    
 
 0.484
ABOM_003455
MADS box transcription factor Mcm1.
   
 
 0.483
ABOM_003693
Alpha-taxilin.
      
 0.476
ABOM_007022
E3 ubiquitin-protein ligase.
    
 0.424
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.