STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_008219Homoserine O-acetyltransferase. (523 aa)    
Predicted Functional Partners:
ABOM_007151
O-acetylhomoserine (Thiol)-lyase.
   
 
 0.838
ABOM_010167
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.783
ABOM_006076
Tryptophan synthase.
  
 
 0.715
ABOM_005498
Tryptophan synthase.
  
 
 0.715
ABOM_010861
Cystathionine gamma-lyase.
   
 
 0.698
ABOM_012047
Cysteine synthase.
   
 0.683
ABOM_012037
Short chain dehydrogenase family protein.
  
 0.674
ABOM_009136
Saccharopine dehydrogenase [NAD(+), L-lysine-forming]; Belongs to the AlaDH/PNT family.
    
 0.668
ABOM_010320
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
   
 0.661
ABOM_010319
Putative oxidoreductase.
   
 0.661
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.