STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_008124Putative Ran-binding protein (RanBP10). (686 aa)    
Predicted Functional Partners:
ABOM_003567
Catabolite degradation protein.
   
 
 0.960
ABOM_008272
Protein fyv10.
  
 
 0.942
ABOM_011689
Regulator of gluconeogenesis Rmd5.
  
 
 0.937
ABOM_005294
CTLH domain-containing protein.
   
 
 0.936
ABOM_004165
Vesicle-mediated transport protein Vid24.
    
 
 0.925
ABOM_011864
SAP30_Sin3_bdg domain-containing protein.
   
 
 0.771
ABOM_008945
Fructose-1; Belongs to the FBPase class 1 family.
    
 
 0.716
ABOM_012087
Yippee domain-containing protein.
   
 
 0.665
ABOM_005740
KIX_2 domain-containing protein.
   
 
 0.665
ABOM_000074
Uncharacterized protein.
   
 
 0.665
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.