STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_009317Gibberellin 20-oxidase. (313 aa)    
Predicted Functional Partners:
ABOM_000851
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.618
ABOM_005674
Putative kinase activator (Atg17).
    
 0.606
ABOM_002096
Putative gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.492
ABOM_009813
Gibberellin 3-beta hydroxylase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.454
ABOM_000528
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.452
ABOM_002638
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.425
ABOM_011415
Serine/threonine protein kinase (Pdd7p).
    
 
 0.406
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.