Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_000832 | ABOM_004180 | A0A1F8AFE0 | A0A1F8A888 | RecQ family helicase MusN. | Ubiquitin-like protein SMT3. | 0.822 |
ABOM_000832 | ABOM_004230 | A0A1F8AFE0 | A0A1F8A7B4 | RecQ family helicase MusN. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.968 |
ABOM_000832 | ABOM_005050 | A0A1F8AFE0 | A0A1F8A552 | RecQ family helicase MusN. | DNA repair protein (Rad57). | 0.952 |
ABOM_000832 | ABOM_006288 | A0A1F8AFE0 | A0A1F8A1T0 | RecQ family helicase MusN. | Putative 3-5 exonuclease. | 0.654 |
ABOM_000832 | ABOM_008524 | A0A1F8AFE0 | A0A1F7ZVX7 | RecQ family helicase MusN. | ATP-dependent DNA helicase. | 0.972 |
ABOM_000832 | ABOM_010822 | A0A1F8AFE0 | A0A1F7ZLV2 | RecQ family helicase MusN. | Postreplication repair E3 ubiquitin-protein ligase rad18. | 0.713 |
ABOM_000832 | ABOM_011069 | A0A1F8AFE0 | A0A1F7ZM78 | RecQ family helicase MusN. | Putative DNA excision repair protein (Rad5). | 0.751 |
ABOM_001273 | ABOM_004180 | A0A1F8AEK6 | A0A1F8A888 | EthD domain-containing protein. | Ubiquitin-like protein SMT3. | 0.822 |
ABOM_001273 | ABOM_004230 | A0A1F8AEK6 | A0A1F8A7B4 | EthD domain-containing protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.950 |
ABOM_001273 | ABOM_005050 | A0A1F8AEK6 | A0A1F8A552 | EthD domain-containing protein. | DNA repair protein (Rad57). | 0.884 |
ABOM_001273 | ABOM_006288 | A0A1F8AEK6 | A0A1F8A1T0 | EthD domain-containing protein. | Putative 3-5 exonuclease. | 0.654 |
ABOM_001273 | ABOM_008524 | A0A1F8AEK6 | A0A1F7ZVX7 | EthD domain-containing protein. | ATP-dependent DNA helicase. | 0.949 |
ABOM_001273 | ABOM_010822 | A0A1F8AEK6 | A0A1F7ZLV2 | EthD domain-containing protein. | Postreplication repair E3 ubiquitin-protein ligase rad18. | 0.697 |
ABOM_001273 | ABOM_011069 | A0A1F8AEK6 | A0A1F7ZM78 | EthD domain-containing protein. | Putative DNA excision repair protein (Rad5). | 0.691 |
ABOM_004180 | ABOM_000832 | A0A1F8A888 | A0A1F8AFE0 | Ubiquitin-like protein SMT3. | RecQ family helicase MusN. | 0.822 |
ABOM_004180 | ABOM_001273 | A0A1F8A888 | A0A1F8AEK6 | Ubiquitin-like protein SMT3. | EthD domain-containing protein. | 0.822 |
ABOM_004180 | ABOM_004230 | A0A1F8A888 | A0A1F8A7B4 | Ubiquitin-like protein SMT3. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.844 |
ABOM_004180 | ABOM_005050 | A0A1F8A888 | A0A1F8A552 | Ubiquitin-like protein SMT3. | DNA repair protein (Rad57). | 0.660 |
ABOM_004180 | ABOM_006288 | A0A1F8A888 | A0A1F8A1T0 | Ubiquitin-like protein SMT3. | Putative 3-5 exonuclease. | 0.880 |
ABOM_004180 | ABOM_008524 | A0A1F8A888 | A0A1F7ZVX7 | Ubiquitin-like protein SMT3. | ATP-dependent DNA helicase. | 0.946 |
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