STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_008524ATP-dependent DNA helicase. (982 aa)    
Predicted Functional Partners:
ABOM_004230
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.982
ABOM_011376
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
 
 0.972
ABOM_000832
RecQ family helicase MusN.
  
 0.972
ABOM_005050
DNA repair protein (Rad57).
  
 
 0.954
ABOM_008998
EthD domain-containing protein.
  
 0.949
ABOM_001273
EthD domain-containing protein.
  
 0.949
ABOM_011069
Putative DNA excision repair protein (Rad5).
   
 
 0.948
ABOM_006288
Putative 3-5 exonuclease.
  
 0.947
ABOM_004180
Ubiquitin-like protein SMT3.
    
 
 0.946
ABOM_010822
Postreplication repair E3 ubiquitin-protein ligase rad18.
    
 
 0.945
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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