STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_006798Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. (617 aa)    
Predicted Functional Partners:
ABOM_001010
Sphingomyelinase family protein.
     
 0.914
ABOM_011079
Ceramide glucosyltransferase.
     
 0.906
ABOM_007517
Neutral ceramidase.
     
 0.905
ABOM_009583
Uncharacterized protein.
   
 0.733
ABOM_004162
Sphingosine kinase (SphK).
    
 0.665
ABOM_009105
Uncharacterized protein.
    
 0.658
ABOM_006823
Putative sphingolipid desaturase.
     
 0.645
ABOM_011434
PAP2 domain protein.
     
 0.634
ABOM_006001
Endonuclease/exonuclease/phosphatase family protein.
     
 0.630
ABOM_006615
Alkaline dihydroceramidase Ydc1.
     
 0.566
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.