STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_006938Uncharacterized protein. (389 aa)    
Predicted Functional Partners:
ABOM_011644
Cytochrome B2; Belongs to the cytochrome b5 family.
   
 0.678
ABOM_007636
Cytochrome B2; Belongs to the cytochrome b5 family.
   
 0.678
ABOM_006831
Cytochrome b2.
   
 0.678
ABOM_007700
(S)-2-hydroxy-acid oxidase.
   
 0.678
ABOM_006010
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 0.678
ABOM_002573
Uncharacterized protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
 0.678
ABOM_000858
Uncharacterized protein.
   
 0.678
ABOM_010327
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.667
ABOM_006924
Malate synthase; Belongs to the malate synthase family.
  
 
 0.629
ABOM_011341
FAD binding domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
 
  
 0.607
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.