STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM8tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (330 aa)    
Predicted Functional Partners:
ABOM_002422
SAGA complex component (Sgf29).
    
 
 0.904
ABOM_006386
Putative tRNA methyltransferase subunit GCD14.
  
 
 0.890
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.876
ABOM_008911
Pseudouridine synthase.
  
 
 0.872
ABOM_012190
Seryl-tRNA synthetase.
   
 
 0.871
ABOM_005922
tRNA m(1)G methyltransferase domain containing protein.
   
 
 0.868
ABOM_000686
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.863
ABOM_010852
Nucleolar protein 12.
   
   0.858
ABOM_008271
Centromere/microtubule-binding protein cbf5.
  
 
 0.855
ABOM_007500
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.
   
   0.848
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.