Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABOM_001519 | ABOM_002622 | A0A1F8ADP8 | A0A1F8A6Q8 | Cytochrome B5; Belongs to the cytochrome b5 family. | Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family. | 0.970 |
ABOM_001519 | ABOM_005785 | A0A1F8ADP8 | A0A1F8A0T8 | Cytochrome B5; Belongs to the cytochrome b5 family. | Uncharacterized protein. | 0.652 |
ABOM_001519 | ABOM_011702 | A0A1F8ADP8 | A0A1F7ZK47 | Cytochrome B5; Belongs to the cytochrome b5 family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.970 |
ABOM_002622 | ABOM_001519 | A0A1F8A6Q8 | A0A1F8ADP8 | Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family. | Cytochrome B5; Belongs to the cytochrome b5 family. | 0.970 |
ABOM_002622 | ABOM_005785 | A0A1F8A6Q8 | A0A1F8A0T8 | Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family. | Uncharacterized protein. | 0.652 |
ABOM_002622 | ABOM_011702 | A0A1F8A6Q8 | A0A1F7ZK47 | Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.970 |
ABOM_005785 | ABOM_001519 | A0A1F8A0T8 | A0A1F8ADP8 | Uncharacterized protein. | Cytochrome B5; Belongs to the cytochrome b5 family. | 0.652 |
ABOM_005785 | ABOM_002622 | A0A1F8A0T8 | A0A1F8A6Q8 | Uncharacterized protein. | Cytochrome B5 mitochondrial; Belongs to the cytochrome b5 family. | 0.652 |
ABOM_005785 | ABOM_007308 | A0A1F8A0T8 | A0A1F7ZXC7 | Uncharacterized protein. | Putative 37S ribosomal protein S11. | 0.513 |
ABOM_005785 | ABOM_007466 | A0A1F8A0T8 | A0A1F7ZZI3 | Uncharacterized protein. | Mitochondrial 37S ribosomal protein MRP2. | 0.511 |
ABOM_005785 | ABOM_007524 | A0A1F8A0T8 | A0A1F7ZTZ3 | Uncharacterized protein. | Mitochondrial 37S ribosomal protein MRP4. | 0.504 |
ABOM_005785 | ABOM_008490 | A0A1F8A0T8 | A0A1F7ZU18 | Uncharacterized protein. | RNA polymerase III transcription factor TFIIIC subunit (Tfc4). | 0.545 |
ABOM_005785 | ABOM_008847 | A0A1F8A0T8 | A0A1F7ZUN2 | Uncharacterized protein. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.507 |
ABOM_005785 | ABOM_009423 | A0A1F8A0T8 | A0A1F7ZTQ0 | Uncharacterized protein. | Putative YT521-B-like splicing factor. | 0.589 |
ABOM_005785 | ABOM_010200 | A0A1F8A0T8 | A0A1F7ZNW6 | Uncharacterized protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.513 |
ABOM_005785 | ABOM_011702 | A0A1F8A0T8 | A0A1F7ZK47 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.652 |
ABOM_007308 | ABOM_005785 | A0A1F7ZXC7 | A0A1F8A0T8 | Putative 37S ribosomal protein S11. | Uncharacterized protein. | 0.513 |
ABOM_007308 | ABOM_007466 | A0A1F7ZXC7 | A0A1F7ZZI3 | Putative 37S ribosomal protein S11. | Mitochondrial 37S ribosomal protein MRP2. | 0.999 |
ABOM_007308 | ABOM_007524 | A0A1F7ZXC7 | A0A1F7ZTZ3 | Putative 37S ribosomal protein S11. | Mitochondrial 37S ribosomal protein MRP4. | 0.999 |
ABOM_007308 | ABOM_009423 | A0A1F7ZXC7 | A0A1F7ZTQ0 | Putative 37S ribosomal protein S11. | Putative YT521-B-like splicing factor. | 0.725 |
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