STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_006346Mitochondrial 54S ribosomal protein YmL47; Belongs to the universal ribosomal protein uL16 family. (231 aa)    
Predicted Functional Partners:
ABOM_010675
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.991
ABOM_009692
Mitochondrial 54S ribosomal protein YmL9; Belongs to the universal ribosomal protein uL3 family.
  
 0.988
ABOM_000622
Elongation factor 3.
   
 
 0.988
ABOM_010912
Mitochondrial 54S ribosomal protein YmL23.
  
 0.987
ABOM_006931
Prion formation protein 1.
   
 
 0.987
ABOM_005842
Mitochondrial 54S ribosomal protein YmL16; Belongs to the universal ribosomal protein uL6 family.
  
 0.987
ABOM_007466
Mitochondrial 37S ribosomal protein MRP2.
  
 
 0.986
ABOM_011513
Mitochondrial 37S ribosomal protein MRPS16.
   
 
 0.985
ABOM_007822
Mitochondrial 54S ribosomal protein YmL19; Belongs to the universal ribosomal protein uL11 family.
  
 0.985
ABOM_007267
Mitochondrial 54S ribosomal protein YmL10/YmL18.
  
 0.985
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.