STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABOM_005536Putative integral plasma membrane protein. (949 aa)    
Predicted Functional Partners:
ABOM_001177
Mannosyl-oligosaccharide glucosidase.
   
   0.749
ABOM_007502
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
    
 
 0.619
ABOM_006318
Glyco_hydro_63 domain-containing protein.
    
   0.565
ABOM_011162
F-box domain protein.
    
 
 0.522
ABOM_005847
GPI transamidase component Gpi16.
    
 
 0.514
ABOM_004474
Calnexin.
    
   0.504
ABOM_011123
3'-5' exonuclease domain-containing protein.
      
 0.475
ABOM_011754
GPI ethanolamine phosphate transferase 1.
      
 0.474
ABOM_008300
UV excision repair protein rhp23.
      
 0.474
ABOM_012099
Cupin domain protein.
      
 0.473
Your Current Organism:
Aspergillus bombycis
NCBI taxonomy Id: 109264
Other names: A. bombycis, Aspergillus bombycis S.W. Peterson, Yoko Ito, B.W. Horn & T. Goto, 2001, CBS 117187, NRRL 26010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.